protein-design-skills

🥈Silver

Claude Code skills for designing and engineering proteins. Researchers and biotech teams use these skills to automate protein design tasks, optimizing sequences for stability, function, and therapeutic applications. Integrates with molecular modeling tools and lab workflows.

8570Updated 1mo ago

Intermediate30min to implementautomation

Saves ~360 min per use

Quick InstallView Source

git clone https://github.com/adaptyvbio/protein-design-skills.git

Works with:

Claude

Overview

About This Skill

Setup & Installation

Quick Install

No install command available. Check the GitHub repository for manual installation instructions.

Alternative Install (Git Clone)

git clone https://github.com/adaptyvbio/protein-design-skills

Requirements

Claude Code or compatible AI agent
Works with: Claude

Quick Start Guide

Install the Skill

Copy the install command above and run it in your terminal.

Open Your AI Agent

Launch Claude Code, Cursor, or your preferred AI coding agent.

Try It Out

Use the prompt template or examples below to test the skill.

Customize

Adapt the skill to your specific use case and workflow.

Usage Examples

Prompt Template

Design a protein with the following specifications: [SPECIFICATIONS]. The protein should be optimized for [SPECIFIC USE CASE] in the [INDUSTRY]. Provide the amino acid sequence, secondary structure prediction, and potential applications. Ensure the design is stable and functional under [ENVIRONMENTAL CONDITIONS].

Example Output

## Protein Design for Therapeutic Applications

### Amino Acid Sequence

`MKTIIALSYIFCLVFAA`

### Secondary Structure Prediction

- **Alpha Helices**: Positions 2-10 and 15-20
- **Beta Sheets**: Positions 11-14
- **Random Coils**: Positions 21-25

### Potential Applications

- **Therapeutic Use**: This protein is designed to bind specifically to a target receptor involved in [DISEASE].
- **Stability**: The protein is stable at physiological temperatures and pH levels.
- **Functionality**: The designed protein shows high affinity and specificity for the target receptor, making it a potential candidate for drug development.

### Environmental Conditions

- **Temperature Range**: 20°C to 37°C
- **pH Range**: 6.5 to 7.5

### Conclusion

This protein design meets the specified requirements and shows promise for therapeutic applications in the pharmaceutical industry.