bioSkills

🥈Silver

bioSkills provides AI coding agents with expert knowledge for bioinformatics workflows. It includes code patterns, best practices, and examples to guide agents through common bioinformatics tasks. Benefits bioinformatics teams by automating repetitive coding tasks and ensuring best practices are followed.

281320Updated Today

Intermediate30min to implementautomation

Saves ~50 min per use

Quick InstallView Source

git clone https://github.com/GPTomics/bioSkills.git

Works with:

Claude

Overview

About This Skill

Setup & Installation

Quick Install

No install command available. Check the GitHub repository for manual installation instructions.

Alternative Install (Git Clone)

git clone https://github.com/GPTomics/bioSkills

Requirements

Claude Code or compatible AI agent
Works with: Claude

Quick Start Guide

Install the Skill

Copy the install command above and run it in your terminal.

Open Your AI Agent

Launch Claude Code, Cursor, or your preferred AI coding agent.

Try It Out

Use the prompt template or examples below to test the skill.

Customize

Adapt the skill to your specific use case and workflow.

Usage Examples

Prompt Template

I need assistance with bioinformatics for my [COMPANY] in the [INDUSTRY]. Can you help me automate the analysis of [DATA] using bioSkills?

Example Output

### Bioinformatics Analysis Report

**Company:** GenTech Bioinformatics  
**Industry:** Biotechnology  
**Data Analyzed:** Gene expression levels from RNA-Seq data  

#### Summary:
The analysis of the RNA-Seq data from GenTech revealed significant differential expression of genes related to immune response. 

#### Key Findings:
- **Upregulated Genes:**
  - IL6 (Fold Change: 3.2)
  - TNF (Fold Change: 2.8)

- **Downregulated Genes:**
  - CD4 (Fold Change: -1.5)
  - FOXP3 (Fold Change: -1.8)

#### Recommendations:
- Focus on the pathways involving IL6 and TNF for further research.
- Investigate the role of CD4 and FOXP3 in immune regulation.

This report provides a comprehensive overview of the gene expression data and serves as a foundation for future experiments.